Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pif1Q80SX8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.84■□□□□ 0.61
Pif1Q80SX8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pif1Q80SX8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pif1Q80SX8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pif1Q80SX8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pif1Q80SX8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.83■□□□□ 0.6
Pif1Q80SX8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pif1Q80SX8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pif1Q80SX8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pif1Q80SX8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pif1Q80SX8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pif1Q80SX8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
Pif1Q80SX8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pif1Q80SX8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pif1Q80SX8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pif1Q80SX8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.82■□□□□ 0.6
Pif1Q80SX8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pif1Q80SX8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pif1Q80SX8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pif1Q80SX8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pif1Q80SX8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pif1Q80SX8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pif1Q80SX8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pif1Q80SX8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pif1Q80SX8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pif1Q80SX8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pif1Q80SX8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pif1Q80SX8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pif1Q80SX8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.78■□□□□ 0.6
Pif1Q80SX8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pif1Q80SX8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.78■□□□□ 0.6
Pif1Q80SX8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pif1Q80SX8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pif1Q80SX8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pif1Q80SX8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Pif1Q80SX8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pif1Q80SX8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pif1Q80SX8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pif1Q80SX8 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.77■□□□□ 0.59
Pif1Q80SX8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pif1Q80SX8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pif1Q80SX8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pif1Q80SX8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pif1Q80SX8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pif1Q80SX8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pif1Q80SX8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.75■□□□□ 0.59
Pif1Q80SX8 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.75■□□□□ 0.59
Pif1Q80SX8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pif1Q80SX8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pif1Q80SX8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pif1Q80SX8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pif1Q80SX8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms