Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Scube3Q66PY1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Golgb1-201ENSMUST00000023534 498 ntBASIC21.47■■□□□ 1.03
Scube3Q66PY1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Scube3Q66PY1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.46■■□□□ 1.03
Scube3Q66PY1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube3Q66PY1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scube3Q66PY1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scube3Q66PY1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scube3Q66PY1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Scube3Q66PY1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scube3Q66PY1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scube3Q66PY1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube3Q66PY1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scube3Q66PY1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube3Q66PY1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube3Q66PY1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.44■■□□□ 1.02
Scube3Q66PY1 Gm21956-201ENSMUST00000179946 522 ntBASIC21.44■■□□□ 1.02
Scube3Q66PY1 Gm13241-201ENSMUST00000094493 780 ntBASIC21.44■■□□□ 1.02
Scube3Q66PY1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube3Q66PY1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scube3Q66PY1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scube3Q66PY1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scube3Q66PY1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scube3Q66PY1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scube3Q66PY1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Scube3Q66PY1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.42■■□□□ 1.02
Scube3Q66PY1 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.42■■□□□ 1.02
Scube3Q66PY1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube3Q66PY1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.42■■□□□ 1.02
Scube3Q66PY1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube3Q66PY1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Scube3Q66PY1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.41■■□□□ 1.02
Scube3Q66PY1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube3Q66PY1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scube3Q66PY1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scube3Q66PY1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scube3Q66PY1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scube3Q66PY1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scube3Q66PY1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scube3Q66PY1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scube3Q66PY1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scube3Q66PY1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scube3Q66PY1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scube3Q66PY1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scube3Q66PY1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scube3Q66PY1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.37■■□□□ 1.01
Scube3Q66PY1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scube3Q66PY1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scube3Q66PY1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scube3Q66PY1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.36■■□□□ 1.01
Scube3Q66PY1 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.36■■□□□ 1.01
Scube3Q66PY1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scube3Q66PY1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scube3Q66PY1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms