Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zic3Q62521 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.14■□□□□ 0.33
Zic3Q62521 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.14■□□□□ 0.33
Zic3Q62521 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zic3Q62521 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zic3Q62521 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zic3Q62521 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zic3Q62521 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zic3Q62521 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zic3Q62521 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zic3Q62521 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zic3Q62521 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zic3Q62521 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zic3Q62521 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zic3Q62521 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Zic3Q62521 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zic3Q62521 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Zic3Q62521 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zic3Q62521 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Zic3Q62521 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Zic3Q62521 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zic3Q62521 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zic3Q62521 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zic3Q62521 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.11■□□□□ 0.33
Zic3Q62521 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.11■□□□□ 0.33
Zic3Q62521 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Zic3Q62521 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zic3Q62521 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zic3Q62521 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zic3Q62521 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Zic3Q62521 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Zic3Q62521 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Zic3Q62521 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.1■□□□□ 0.33
Zic3Q62521 Gm22238-201ENSMUST00000175222 88 ntBASIC17.1■□□□□ 0.33
Zic3Q62521 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Zic3Q62521 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zic3Q62521 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Zic3Q62521 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.09■□□□□ 0.33
Zic3Q62521 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.09■□□□□ 0.33
Zic3Q62521 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zic3Q62521 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.09■□□□□ 0.33
Zic3Q62521 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zic3Q62521 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zic3Q62521 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Zic3Q62521 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Zic3Q62521 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zic3Q62521 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Zic3Q62521 Gm9870-201ENSMUST00000063874 645 ntBASIC17.08■□□□□ 0.32
Zic3Q62521 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zic3Q62521 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zic3Q62521 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zic3Q62521 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.07■□□□□ 0.32
Zic3Q62521 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Zic3Q62521 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zic3Q62521 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.06■□□□□ 0.32
Zic3Q62521 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Zic3Q62521 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.06■□□□□ 0.32
Zic3Q62521 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Zic3Q62521 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.06■□□□□ 0.32
Zic3Q62521 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zic3Q62521 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms