Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VcanQ62059 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
VcanQ62059 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VcanQ62059 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VcanQ62059 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VcanQ62059 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.61■□□□□ 0.73
VcanQ62059 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VcanQ62059 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.61■□□□□ 0.73
VcanQ62059 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VcanQ62059 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.61■□□□□ 0.73
VcanQ62059 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VcanQ62059 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.6■□□□□ 0.73
VcanQ62059 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.6■□□□□ 0.73
VcanQ62059 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.59■□□□□ 0.73
VcanQ62059 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VcanQ62059 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VcanQ62059 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.58■□□□□ 0.73
VcanQ62059 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.58■□□□□ 0.73
VcanQ62059 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.58■□□□□ 0.73
VcanQ62059 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VcanQ62059 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VcanQ62059 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.58■□□□□ 0.72
VcanQ62059 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Mir6982-201ENSMUST00000184354 68 ntBASIC19.57■□□□□ 0.72
VcanQ62059 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
VcanQ62059 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.57■□□□□ 0.72
VcanQ62059 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VcanQ62059 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.57■□□□□ 0.72
VcanQ62059 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VcanQ62059 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VcanQ62059 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.56■□□□□ 0.72
VcanQ62059 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VcanQ62059 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.56■□□□□ 0.72
VcanQ62059 Gm42778-201ENSMUST00000199644 553 ntBASIC19.56■□□□□ 0.72
VcanQ62059 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VcanQ62059 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VcanQ62059 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VcanQ62059 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.55■□□□□ 0.72
VcanQ62059 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VcanQ62059 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VcanQ62059 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VcanQ62059 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VcanQ62059 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VcanQ62059 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VcanQ62059 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VcanQ62059 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VcanQ62059 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VcanQ62059 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.54■□□□□ 0.72
VcanQ62059 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VcanQ62059 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.54■□□□□ 0.72
VcanQ62059 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VcanQ62059 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.54■□□□□ 0.72
VcanQ62059 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.54■□□□□ 0.72
VcanQ62059 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VcanQ62059 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.53■□□□□ 0.72
VcanQ62059 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.53■□□□□ 0.72
VcanQ62059 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VcanQ62059 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.53■□□□□ 0.72
VcanQ62059 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VcanQ62059 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VcanQ62059 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VcanQ62059 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.53■□□□□ 0.72
VcanQ62059 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VcanQ62059 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VcanQ62059 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VcanQ62059 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VcanQ62059 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VcanQ62059 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VcanQ62059 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VcanQ62059 Gm4968-201ENSMUST00000071458 858 ntBASIC19.52■□□□□ 0.72
VcanQ62059 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VcanQ62059 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VcanQ62059 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VcanQ62059 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VcanQ62059 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VcanQ62059 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VcanQ62059 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.52■□□□□ 0.71
VcanQ62059 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
VcanQ62059 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VcanQ62059 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
VcanQ62059 Gm8520-201ENSMUST00000186517 868 ntBASIC19.5■□□□□ 0.71
VcanQ62059 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.5■□□□□ 0.71
VcanQ62059 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VcanQ62059 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
VcanQ62059 Gm12441-201ENSMUST00000121806 588 ntBASIC19.5■□□□□ 0.71
VcanQ62059 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.5■□□□□ 0.71
VcanQ62059 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms