Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.62■□□□□ 0.73
Clhc1Q5M6W3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clhc1Q5M6W3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.6■□□□□ 0.73
Clhc1Q5M6W3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clhc1Q5M6W3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Clhc1Q5M6W3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Clhc1Q5M6W3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Clhc1Q5M6W3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Clhc1Q5M6W3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Clhc1Q5M6W3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clhc1Q5M6W3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clhc1Q5M6W3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clhc1Q5M6W3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clhc1Q5M6W3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms