Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28bQ45KJ6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28bQ45KJ6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28bQ45KJ6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28bQ45KJ6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28bQ45KJ6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28bQ45KJ6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28bQ45KJ6 Gm43017-201ENSMUST00000198296 752 ntBASIC19.44■□□□□ 0.7
Lin28bQ45KJ6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28bQ45KJ6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28bQ45KJ6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28bQ45KJ6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28bQ45KJ6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Lin28bQ45KJ6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
Lin28bQ45KJ6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lin28bQ45KJ6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Gm8493-201ENSMUST00000196881 489 ntBASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lin28bQ45KJ6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.39■□□□□ 0.7
Lin28bQ45KJ6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lin28bQ45KJ6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lin28bQ45KJ6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.38■□□□□ 0.69
Lin28bQ45KJ6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lin28bQ45KJ6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lin28bQ45KJ6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lin28bQ45KJ6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lin28bQ45KJ6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.36■□□□□ 0.69
Lin28bQ45KJ6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lin28bQ45KJ6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lin28bQ45KJ6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms