Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Fam196aQ3USH1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.77■□□□□ 0.92
Fam196aQ3USH1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.77■□□□□ 0.92
Fam196aQ3USH1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.77■□□□□ 0.92
Fam196aQ3USH1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Fam196aQ3USH1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Fam196aQ3USH1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
Fam196aQ3USH1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Fam196aQ3USH1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Fam196aQ3USH1 Gm10252-201ENSMUST00000209541 832 ntBASIC20.76■□□□□ 0.91
Fam196aQ3USH1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.76■□□□□ 0.91
Fam196aQ3USH1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam196aQ3USH1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.74■□□□□ 0.91
Fam196aQ3USH1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.74■□□□□ 0.91
Fam196aQ3USH1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam196aQ3USH1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam196aQ3USH1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam196aQ3USH1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam196aQ3USH1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.73■□□□□ 0.91
Fam196aQ3USH1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam196aQ3USH1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
Fam196aQ3USH1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.73■□□□□ 0.91
Fam196aQ3USH1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.72■□□□□ 0.91
Fam196aQ3USH1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam196aQ3USH1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Fam196aQ3USH1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.7■□□□□ 0.9
Fam196aQ3USH1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam196aQ3USH1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 Mir7071-201ENSMUST00000184847 69 ntBASIC20.68■□□□□ 0.9
Fam196aQ3USH1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fam196aQ3USH1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fam196aQ3USH1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Fam196aQ3USH1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Fam196aQ3USH1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Fam196aQ3USH1 Gm20760-201ENSMUST00000179197 648 ntBASIC20.67■□□□□ 0.9
Fam196aQ3USH1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.67■□□□□ 0.9
Fam196aQ3USH1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.66■□□□□ 0.9
Fam196aQ3USH1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fam196aQ3USH1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fam196aQ3USH1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Fam196aQ3USH1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fam196aQ3USH1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.65■□□□□ 0.9
Fam196aQ3USH1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.65■□□□□ 0.9
Fam196aQ3USH1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Fam196aQ3USH1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fam196aQ3USH1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms