Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nkx6-3Q3UHX8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-3Q3UHX8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-3Q3UHX8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nkx6-3Q3UHX8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-3Q3UHX8 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.36■□□□□ 0.69
Nkx6-3Q3UHX8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-3Q3UHX8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-3Q3UHX8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-3Q3UHX8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-3Q3UHX8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.34■□□□□ 0.69
Nkx6-3Q3UHX8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx6-3Q3UHX8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx6-3Q3UHX8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx6-3Q3UHX8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx6-3Q3UHX8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.33■□□□□ 0.69
Nkx6-3Q3UHX8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nkx6-3Q3UHX8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.33■□□□□ 0.68
Nkx6-3Q3UHX8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx6-3Q3UHX8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx6-3Q3UHX8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx6-3Q3UHX8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-3Q3UHX8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx6-3Q3UHX8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-3Q3UHX8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms