Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Nkx3-2P97503 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx3-2P97503 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.22■□□□□ 0.67
Nkx3-2P97503 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx3-2P97503 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx3-2P97503 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx3-2P97503 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nkx3-2P97503 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx3-2P97503 Gm7143-201ENSMUST00000222811 859 ntBASIC19.2■□□□□ 0.66
Nkx3-2P97503 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx3-2P97503 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx3-2P97503 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.2■□□□□ 0.66
Nkx3-2P97503 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx3-2P97503 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkx3-2P97503 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx3-2P97503 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx3-2P97503 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.18■□□□□ 0.66
Nkx3-2P97503 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx3-2P97503 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx3-2P97503 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx3-2P97503 Gm27454-201ENSMUST00000185090 204 ntBASIC19.18■□□□□ 0.66
Nkx3-2P97503 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx3-2P97503 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx3-2P97503 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nkx3-2P97503 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx3-2P97503 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx3-2P97503 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx3-2P97503 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Nkx3-2P97503 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.16■□□□□ 0.66
Nkx3-2P97503 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.16■□□□□ 0.66
Nkx3-2P97503 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx3-2P97503 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.15■□□□□ 0.66
Nkx3-2P97503 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx3-2P97503 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx3-2P97503 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx3-2P97503 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.14■□□□□ 0.66
Nkx3-2P97503 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms