Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.12■□□□□ 0.65
Six5P70178 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Six5P70178 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Six5P70178 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Six5P70178 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Six5P70178 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.11■□□□□ 0.65
Six5P70178 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.11■□□□□ 0.65
Six5P70178 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six5P70178 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Six5P70178 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six5P70178 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.11■□□□□ 0.65
Six5P70178 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six5P70178 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six5P70178 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six5P70178 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six5P70178 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.1■□□□□ 0.65
Six5P70178 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.1■□□□□ 0.65
Six5P70178 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.1■□□□□ 0.65
Six5P70178 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six5P70178 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.09■□□□□ 0.65
Six5P70178 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.09■□□□□ 0.65
Six5P70178 Gm14117-201ENSMUST00000122417 843 ntBASIC19.09■□□□□ 0.65
Six5P70178 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Six5P70178 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six5P70178 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six5P70178 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six5P70178 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six5P70178 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Six5P70178 Gm22238-201ENSMUST00000175222 88 ntBASIC19.08■□□□□ 0.64
Six5P70178 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six5P70178 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six5P70178 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six5P70178 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Six5P70178 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six5P70178 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six5P70178 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six5P70178 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.07■□□□□ 0.64
Six5P70178 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.07■□□□□ 0.64
Six5P70178 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.07■□□□□ 0.64
Six5P70178 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Six5P70178 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six5P70178 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six5P70178 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six5P70178 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six5P70178 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Six5P70178 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.06■□□□□ 0.64
Six5P70178 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.06■□□□□ 0.64
Six5P70178 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six5P70178 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.06■□□□□ 0.64
Six5P70178 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.06■□□□□ 0.64
Six5P70178 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.05■□□□□ 0.64
Six5P70178 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 Gm9870-201ENSMUST00000063874 645 ntBASIC19.05■□□□□ 0.64
Six5P70178 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six5P70178 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Six5P70178 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Six5P70178 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six5P70178 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six5P70178 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six5P70178 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six5P70178 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six5P70178 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.03■□□□□ 0.64
Six5P70178 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Six5P70178 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Six5P70178 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six5P70178 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six5P70178 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six5P70178 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.02■□□□□ 0.64
Six5P70178 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six5P70178 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six5P70178 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Six5P70178 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six5P70178 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Six5P70178 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms