Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tubgcp3P58854 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp3P58854 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp3P58854 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.85■□□□□ 0.93
Tubgcp3P58854 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Tubgcp3P58854 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp3P58854 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp3P58854 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp3P58854 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp3P58854 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp3P58854 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Tubgcp3P58854 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp3P58854 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp3P58854 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp3P58854 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp3P58854 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp3P58854 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp3P58854 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.82■□□□□ 0.92
Tubgcp3P58854 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.82■□□□□ 0.92
Tubgcp3P58854 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp3P58854 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp3P58854 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Gm15820-201ENSMUST00000201566 728 ntBASIC20.81■□□□□ 0.92
Tubgcp3P58854 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Gm5812-201ENSMUST00000061073 957 ntBASIC20.81■□□□□ 0.92
Tubgcp3P58854 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp3P58854 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.8■□□□□ 0.92
Tubgcp3P58854 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.8■□□□□ 0.92
Tubgcp3P58854 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp3P58854 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Tubgcp3P58854 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.79■□□□□ 0.92
Tubgcp3P58854 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tubgcp3P58854 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp3P58854 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.79■□□□□ 0.92
Tubgcp3P58854 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp3P58854 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp3P58854 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp3P58854 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.78■□□□□ 0.92
Tubgcp3P58854 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.78■□□□□ 0.92
Tubgcp3P58854 Gm40881-201ENSMUST00000223397 166 ntBASIC20.78■□□□□ 0.92
Tubgcp3P58854 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp3P58854 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp3P58854 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp3P58854 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp3P58854 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp3P58854 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.76■□□□□ 0.91
Tubgcp3P58854 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tubgcp3P58854 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp3P58854 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp3P58854 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp3P58854 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp3P58854 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.74■□□□□ 0.91
Tubgcp3P58854 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp3P58854 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp3P58854 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.74■□□□□ 0.91
Tubgcp3P58854 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp3P58854 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms