Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1aP25118 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1aP25118 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1aP25118 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Gm10232-201ENSMUST00000089221 720 ntBASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf1aP25118 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
Tnfrsf1aP25118 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.02■□□□□ 0.32
Tnfrsf1aP25118 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf1aP25118 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.02■□□□□ 0.32
Tnfrsf1aP25118 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf1aP25118 Gm10399-202ENSMUST00000202768 748 ntBASIC17.02■□□□□ 0.32
Tnfrsf1aP25118 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.02■□□□□ 0.32
Tnfrsf1aP25118 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf1aP25118 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf1aP25118 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Tnfrsf1aP25118 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Tnfrsf1aP25118 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf1aP25118 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.02■□□□□ 0.31
Tnfrsf1aP25118 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf1aP25118 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf1aP25118 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf1aP25118 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms