Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dkk1O54908 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dkk1O54908 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.65■□□□□ 0.42
Dkk1O54908 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Dkk1O54908 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dkk1O54908 Gm7143-201ENSMUST00000222811 859 ntBASIC17.65■□□□□ 0.42
Dkk1O54908 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dkk1O54908 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Dkk1O54908 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dkk1O54908 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.65■□□□□ 0.42
Dkk1O54908 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dkk1O54908 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Dkk1O54908 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dkk1O54908 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dkk1O54908 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dkk1O54908 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.64■□□□□ 0.41
Dkk1O54908 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Dkk1O54908 Gm14913-201ENSMUST00000120011 1093 ntBASIC17.64■□□□□ 0.41
Dkk1O54908 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Dkk1O54908 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dkk1O54908 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Dkk1O54908 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Dkk1O54908 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dkk1O54908 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dkk1O54908 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dkk1O54908 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dkk1O54908 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Dkk1O54908 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dkk1O54908 AC102523.2-201ENSMUST00000227813 983 ntBASIC17.63■□□□□ 0.41
Dkk1O54908 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Dkk1O54908 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Dkk1O54908 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dkk1O54908 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Dkk1O54908 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Dkk1O54908 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Dkk1O54908 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dkk1O54908 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.61■□□□□ 0.41
Dkk1O54908 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.61■□□□□ 0.41
Dkk1O54908 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.61■□□□□ 0.41
Dkk1O54908 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Dkk1O54908 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.61■□□□□ 0.41
Dkk1O54908 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
Dkk1O54908 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dkk1O54908 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dkk1O54908 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.6■□□□□ 0.41
Dkk1O54908 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.6■□□□□ 0.41
Dkk1O54908 Gm9870-201ENSMUST00000063874 645 ntBASIC17.6■□□□□ 0.41
Dkk1O54908 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dkk1O54908 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dkk1O54908 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dkk1O54908 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Dkk1O54908 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dkk1O54908 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dkk1O54908 Gm38116-201ENSMUST00000193873 1533 ntBASIC17.59■□□□□ 0.41
Dkk1O54908 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dkk1O54908 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dkk1O54908 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Dkk1O54908 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.58■□□□□ 0.41
Dkk1O54908 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Dkk1O54908 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Dkk1O54908 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dkk1O54908 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dkk1O54908 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Dkk1O54908 Gm17872-201ENSMUST00000222550 532 ntBASIC17.58■□□□□ 0.4
Dkk1O54908 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dkk1O54908 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Dkk1O54908 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.57■□□□□ 0.4
Dkk1O54908 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.57■□□□□ 0.4
Dkk1O54908 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dkk1O54908 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.56■□□□□ 0.4
Dkk1O54908 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms