Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sgo2bJ3QMK1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgo2bJ3QMK1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgo2bJ3QMK1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sgo2bJ3QMK1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sgo2bJ3QMK1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Sgo2bJ3QMK1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sgo2bJ3QMK1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sgo2bJ3QMK1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sgo2bJ3QMK1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sgo2bJ3QMK1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sgo2bJ3QMK1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sgo2bJ3QMK1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sgo2bJ3QMK1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sgo2bJ3QMK1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sgo2bJ3QMK1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sgo2bJ3QMK1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Gm40881-201ENSMUST00000223397 166 ntBASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgo2bJ3QMK1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgo2bJ3QMK1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sgo2bJ3QMK1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgo2bJ3QMK1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.31■□□□□ 0.84
Sgo2bJ3QMK1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.31■□□□□ 0.84
Sgo2bJ3QMK1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Sgo2bJ3QMK1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sgo2bJ3QMK1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.29■□□□□ 0.84
Sgo2bJ3QMK1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgo2bJ3QMK1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms