Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5089A1L3C8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Gm40848-201ENSMUST00000221998 324 ntBASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Gm10493-201ENSMUST00000097270 612 ntBASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm5089A1L3C8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5089A1L3C8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Gm26571-201ENSMUST00000181399 666 ntBASIC16.42■□□□□ 0.22
Gm5089A1L3C8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5089A1L3C8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.41■□□□□ 0.22
Gm5089A1L3C8 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.41■□□□□ 0.22
Gm5089A1L3C8 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5089A1L3C8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Gm27405-201ENSMUST00000184201 112 ntBASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm5089A1L3C8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gm5089A1L3C8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gm5089A1L3C8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Gm42642-201ENSMUST00000200683 355 ntBASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5089A1L3C8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.39■□□□□ 0.21
Gm5089A1L3C8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5089A1L3C8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5089A1L3C8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.37■□□□□ 0.21
Gm5089A1L3C8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Gm5089A1L3C8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5089A1L3C8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5089A1L3C8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5089A1L3C8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms