Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trbv17A0A140T8P8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv17A0A140T8P8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv17A0A140T8P8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv17A0A140T8P8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trbv17A0A140T8P8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Trbv17A0A140T8P8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv17A0A140T8P8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv17A0A140T8P8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv17A0A140T8P8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv17A0A140T8P8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Etf1-202ENSMUST00000180351 108 ntBASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv17A0A140T8P8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Notumos-201ENSMUST00000151998 2659 ntBASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv17A0A140T8P8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms