Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
4933424G06RikA0A140LIP3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
4933424G06RikA0A140LIP3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
4933424G06RikA0A140LIP3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
4933424G06RikA0A140LIP3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.89■□□□□ 0.93
4933424G06RikA0A140LIP3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
4933424G06RikA0A140LIP3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
4933424G06RikA0A140LIP3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
4933424G06RikA0A140LIP3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
4933424G06RikA0A140LIP3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
4933424G06RikA0A140LIP3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
4933424G06RikA0A140LIP3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
4933424G06RikA0A140LIP3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
4933424G06RikA0A140LIP3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
4933424G06RikA0A140LIP3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
4933424G06RikA0A140LIP3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
4933424G06RikA0A140LIP3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
4933424G06RikA0A140LIP3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
4933424G06RikA0A140LIP3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.83■□□□□ 0.92
4933424G06RikA0A140LIP3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
4933424G06RikA0A140LIP3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Mir7075-201ENSMUST00000184187 82 ntBASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
4933424G06RikA0A140LIP3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
4933424G06RikA0A140LIP3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
4933424G06RikA0A140LIP3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
4933424G06RikA0A140LIP3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
4933424G06RikA0A140LIP3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.79■□□□□ 0.92
4933424G06RikA0A140LIP3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
4933424G06RikA0A140LIP3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
4933424G06RikA0A140LIP3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms