Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-2A0A0G2JF93 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav13n-2A0A0G2JF93 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav13n-2A0A0G2JF93 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Mir3960-201ENSMUST00000198213 73 ntBASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-2A0A0G2JF93 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-2A0A0G2JF93 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-2A0A0G2JF93 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-2A0A0G2JF93 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav13n-2A0A0G2JF93 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-2A0A0G2JF93 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-2A0A0G2JF93 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 AC164883.3-201ENSMUST00000227396 1774 ntBASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-2A0A0G2JF93 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-2A0A0G2JF93 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms