Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.67□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv1-56A0A0A6YXG2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms