Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-4A0A075B631 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav9n-4A0A075B631 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-4A0A075B631 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.19
Trav9n-4A0A075B631 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav9n-4A0A075B631 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav9n-4A0A075B631 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-4A0A075B631 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Trav9n-4A0A075B631 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-4A0A075B631 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.86□□□□□ -0.19
Trav9n-4A0A075B631 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms