Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav7n-4A0A075B620 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7n-4A0A075B620 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trav7n-4A0A075B620 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.46■□□□□ 0.06
Trav7n-4A0A075B620 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.06
Trav7n-4A0A075B620 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-4A0A075B620 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-4A0A075B620 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-4A0A075B620 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav7n-4A0A075B620 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7n-4A0A075B620 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7n-4A0A075B620 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms