Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-1A0A075B5Z8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-1A0A075B5Z8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-1A0A075B5Z8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-1A0A075B5Z8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
Trav6-1A0A075B5Z8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-1A0A075B5Z8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-1A0A075B5Z8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Gm7332-201ENSMUST00000118351 454 ntBASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Gm27502-201ENSMUST00000183495 199 ntBASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-1A0A075B5Z8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-1A0A075B5Z8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-1A0A075B5Z8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6-1A0A075B5Z8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-1A0A075B5Z8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-1A0A075B5Z8 Golph3-202ENSMUST00000226517 2359 ntBASIC16.42■□□□□ 0.22
Trav6-1A0A075B5Z8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-1A0A075B5Z8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-1A0A075B5Z8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.39■□□□□ 0.22
Trav6-1A0A075B5Z8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav6-1A0A075B5Z8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-1A0A075B5Z8 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.38■□□□□ 0.21
Trav6-1A0A075B5Z8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-1A0A075B5Z8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-1A0A075B5Z8 Iqck-206ENSMUST00000208658 2891 ntBASIC16.36■□□□□ 0.21
Trav6-1A0A075B5Z8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-1A0A075B5Z8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-1A0A075B5Z8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms