Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna6Q9R0W9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chrna6Q9R0W9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna6Q9R0W9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna6Q9R0W9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrna6Q9R0W9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna6Q9R0W9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna6Q9R0W9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Chrna6Q9R0W9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna6Q9R0W9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chrna6Q9R0W9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Chrna6Q9R0W9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chrna6Q9R0W9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
Chrna6Q9R0W9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna6Q9R0W9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna6Q9R0W9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chrna6Q9R0W9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chrna6Q9R0W9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chrna6Q9R0W9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Chrna6Q9R0W9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna6Q9R0W9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna6Q9R0W9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna6Q9R0W9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.8■□□□□ 0.92
Chrna6Q9R0W9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna6Q9R0W9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna6Q9R0W9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna6Q9R0W9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms