Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.42■■□□□ 1.34
Trim11Q99PQ2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trim11Q99PQ2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Trim11Q99PQ2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Gm10399-202ENSMUST00000202768 748 ntBASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Gm10232-201ENSMUST00000089221 720 ntBASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim11Q99PQ2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim11Q99PQ2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
Trim11Q99PQ2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim11Q99PQ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim11Q99PQ2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim11Q99PQ2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim11Q99PQ2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim11Q99PQ2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim11Q99PQ2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim11Q99PQ2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim11Q99PQ2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.36■■□□□ 1.33
Trim11Q99PQ2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.35■■□□□ 1.33
Trim11Q99PQ2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.34■■□□□ 1.33
Trim11Q99PQ2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim11Q99PQ2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.33■■□□□ 1.32
Trim11Q99PQ2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Trim11Q99PQ2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim11Q99PQ2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim11Q99PQ2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim11Q99PQ2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim11Q99PQ2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim11Q99PQ2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim11Q99PQ2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Trim11Q99PQ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim11Q99PQ2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim11Q99PQ2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms