Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim33Q99PP7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.28■□□□□ 0.84
Trim33Q99PP7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim33Q99PP7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.28■□□□□ 0.84
Trim33Q99PP7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim33Q99PP7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim33Q99PP7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Trim33Q99PP7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim33Q99PP7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim33Q99PP7 Rps24-207ENSMUST00000224568 714 ntBASIC20.27■□□□□ 0.84
Trim33Q99PP7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim33Q99PP7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim33Q99PP7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim33Q99PP7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim33Q99PP7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim33Q99PP7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trim33Q99PP7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim33Q99PP7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim33Q99PP7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim33Q99PP7 Etf1-202ENSMUST00000180351 108 ntBASIC20.26■□□□□ 0.83
Trim33Q99PP7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim33Q99PP7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim33Q99PP7 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.26■□□□□ 0.83
Trim33Q99PP7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.25■□□□□ 0.83
Trim33Q99PP7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.25■□□□□ 0.83
Trim33Q99PP7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim33Q99PP7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim33Q99PP7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim33Q99PP7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim33Q99PP7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim33Q99PP7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Trim33Q99PP7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim33Q99PP7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.24■□□□□ 0.83
Trim33Q99PP7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim33Q99PP7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim33Q99PP7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim33Q99PP7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.23■□□□□ 0.83
Trim33Q99PP7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim33Q99PP7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim33Q99PP7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim33Q99PP7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim33Q99PP7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim33Q99PP7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.21■□□□□ 0.83
Trim33Q99PP7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim33Q99PP7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim33Q99PP7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim33Q99PP7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim33Q99PP7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim33Q99PP7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim33Q99PP7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim33Q99PP7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim33Q99PP7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim33Q99PP7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim33Q99PP7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Trim33Q99PP7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim33Q99PP7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trim33Q99PP7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim33Q99PP7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms