Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raf1Q99N57 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.32■□□□□ 0.52
Raf1Q99N57 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.32■□□□□ 0.52
Raf1Q99N57 Gm45444-201ENSMUST00000211394 898 ntBASIC18.32■□□□□ 0.52
Raf1Q99N57 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Raf1Q99N57 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.32■□□□□ 0.52
Raf1Q99N57 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Raf1Q99N57 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Raf1Q99N57 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Raf1Q99N57 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raf1Q99N57 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Raf1Q99N57 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Raf1Q99N57 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.31■□□□□ 0.52
Raf1Q99N57 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Raf1Q99N57 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Raf1Q99N57 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Raf1Q99N57 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raf1Q99N57 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Raf1Q99N57 Gm13238-201ENSMUST00000117655 780 ntBASIC18.3■□□□□ 0.52
Raf1Q99N57 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raf1Q99N57 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raf1Q99N57 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.3■□□□□ 0.52
Raf1Q99N57 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.3■□□□□ 0.52
Raf1Q99N57 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raf1Q99N57 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raf1Q99N57 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raf1Q99N57 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Raf1Q99N57 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
Raf1Q99N57 Gm45102-201ENSMUST00000207427 857 ntBASIC18.29■□□□□ 0.52
Raf1Q99N57 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raf1Q99N57 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Raf1Q99N57 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.29■□□□□ 0.52
Raf1Q99N57 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raf1Q99N57 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raf1Q99N57 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raf1Q99N57 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raf1Q99N57 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raf1Q99N57 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Raf1Q99N57 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.28■□□□□ 0.52
Raf1Q99N57 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.28■□□□□ 0.52
Raf1Q99N57 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raf1Q99N57 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Raf1Q99N57 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raf1Q99N57 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.28■□□□□ 0.52
Raf1Q99N57 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Raf1Q99N57 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raf1Q99N57 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Raf1Q99N57 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.27■□□□□ 0.52
Raf1Q99N57 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.27■□□□□ 0.52
Raf1Q99N57 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raf1Q99N57 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Raf1Q99N57 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Raf1Q99N57 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.27■□□□□ 0.51
Raf1Q99N57 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Raf1Q99N57 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Raf1Q99N57 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Raf1Q99N57 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Raf1Q99N57 Gm14117-201ENSMUST00000122417 843 ntBASIC18.26■□□□□ 0.51
Raf1Q99N57 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Raf1Q99N57 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raf1Q99N57 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raf1Q99N57 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Raf1Q99N57 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.26■□□□□ 0.51
Raf1Q99N57 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raf1Q99N57 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.25■□□□□ 0.51
Raf1Q99N57 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raf1Q99N57 Golph3-202ENSMUST00000226517 2359 ntBASIC18.24■□□□□ 0.51
Raf1Q99N57 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Raf1Q99N57 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.24■□□□□ 0.51
Raf1Q99N57 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Raf1Q99N57 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raf1Q99N57 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Raf1Q99N57 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raf1Q99N57 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raf1Q99N57 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raf1Q99N57 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Raf1Q99N57 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raf1Q99N57 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raf1Q99N57 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raf1Q99N57 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Raf1Q99N57 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raf1Q99N57 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raf1Q99N57 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Raf1Q99N57 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raf1Q99N57 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 296.3 ms