Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Scrt1Q99M85 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scrt1Q99M85 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.99■□□□□ 0.47
Scrt1Q99M85 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Mir7075-201ENSMUST00000184187 82 ntBASIC17.99■□□□□ 0.47
Scrt1Q99M85 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.99■□□□□ 0.47
Scrt1Q99M85 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scrt1Q99M85 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Scrt1Q99M85 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scrt1Q99M85 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scrt1Q99M85 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scrt1Q99M85 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scrt1Q99M85 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scrt1Q99M85 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Gm5874-201ENSMUST00000096101 508 ntBASIC17.95■□□□□ 0.46
Scrt1Q99M85 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scrt1Q99M85 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scrt1Q99M85 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.93■□□□□ 0.46
Scrt1Q99M85 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.93■□□□□ 0.46
Scrt1Q99M85 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scrt1Q99M85 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scrt1Q99M85 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Scrt1Q99M85 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scrt1Q99M85 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scrt1Q99M85 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scrt1Q99M85 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scrt1Q99M85 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.91■□□□□ 0.46
Scrt1Q99M85 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scrt1Q99M85 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scrt1Q99M85 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scrt1Q99M85 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scrt1Q99M85 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
Scrt1Q99M85 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scrt1Q99M85 Gm9870-201ENSMUST00000063874 645 ntBASIC17.89■□□□□ 0.45
Scrt1Q99M85 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scrt1Q99M85 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scrt1Q99M85 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms