Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk9Q99J95 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk9Q99J95 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk9Q99J95 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk9Q99J95 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk9Q99J95 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.58■□□□□ 0.89
Cdk9Q99J95 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdk9Q99J95 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.58■□□□□ 0.88
Cdk9Q99J95 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Cdk9Q99J95 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk9Q99J95 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk9Q99J95 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk9Q99J95 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk9Q99J95 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.57■□□□□ 0.88
Cdk9Q99J95 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk9Q99J95 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk9Q99J95 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk9Q99J95 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk9Q99J95 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Cap2-205ENSMUST00000225824 1634 ntBASIC20.56■□□□□ 0.88
Cdk9Q99J95 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk9Q99J95 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdk9Q99J95 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk9Q99J95 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.53■□□□□ 0.88
Cdk9Q99J95 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk9Q99J95 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk9Q99J95 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.52■□□□□ 0.88
Cdk9Q99J95 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk9Q99J95 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk9Q99J95 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk9Q99J95 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cdk9Q99J95 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.52■□□□□ 0.87
Cdk9Q99J95 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdk9Q99J95 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdk9Q99J95 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdk9Q99J95 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdk9Q99J95 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk9Q99J95 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk9Q99J95 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.49■□□□□ 0.87
Cdk9Q99J95 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk9Q99J95 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk9Q99J95 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk9Q99J95 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk9Q99J95 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk9Q99J95 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk9Q99J95 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdk9Q99J95 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms