Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdhb4Q91XZ6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb4Q91XZ6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Pcdhb4Q91XZ6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb4Q91XZ6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb4Q91XZ6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdhb4Q91XZ6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb4Q91XZ6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb4Q91XZ6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb4Q91XZ6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb4Q91XZ6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Gm13238-201ENSMUST00000117655 780 ntBASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Gm5921-201ENSMUST00000075898 882 ntBASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb4Q91XZ6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb4Q91XZ6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb4Q91XZ6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb4Q91XZ6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb4Q91XZ6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb4Q91XZ6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb4Q91XZ6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb4Q91XZ6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb4Q91XZ6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Gm43566-201ENSMUST00000196851 808 ntBASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb4Q91XZ6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb4Q91XZ6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb4Q91XZ6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms