Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc3Q91XX1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc3Q91XX1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc3Q91XX1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc3Q91XX1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc3Q91XX1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhgc3Q91XX1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc3Q91XX1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc3Q91XX1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc3Q91XX1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc3Q91XX1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc3Q91XX1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc3Q91XX1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgc3Q91XX1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgc3Q91XX1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms