Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc65Q8VHI7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Ccdc65Q8VHI7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc65Q8VHI7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc65Q8VHI7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc65Q8VHI7 Gm15546-201ENSMUST00000122095 826 ntBASIC21.64■■□□□ 1.05
Ccdc65Q8VHI7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc65Q8VHI7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc65Q8VHI7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc65Q8VHI7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc65Q8VHI7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc65Q8VHI7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.62■■□□□ 1.05
Ccdc65Q8VHI7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.62■■□□□ 1.05
Ccdc65Q8VHI7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc65Q8VHI7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Ccdc65Q8VHI7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc65Q8VHI7 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.61■■□□□ 1.05
Ccdc65Q8VHI7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc65Q8VHI7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc65Q8VHI7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Iqck-206ENSMUST00000208658 2891 ntBASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc65Q8VHI7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.59■■□□□ 1.05
Ccdc65Q8VHI7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc65Q8VHI7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc65Q8VHI7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc65Q8VHI7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc65Q8VHI7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc65Q8VHI7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc65Q8VHI7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc65Q8VHI7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc65Q8VHI7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ccdc65Q8VHI7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Ccdc65Q8VHI7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc65Q8VHI7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc65Q8VHI7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccdc65Q8VHI7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc65Q8VHI7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc65Q8VHI7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc65Q8VHI7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc65Q8VHI7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc65Q8VHI7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc65Q8VHI7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc65Q8VHI7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc65Q8VHI7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccdc65Q8VHI7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc65Q8VHI7 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.53■■□□□ 1.04
Ccdc65Q8VHI7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc65Q8VHI7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms