Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.88■□□□□ 0.61
Vmn1r28Q8R2C9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r28Q8R2C9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.86■□□□□ 0.61
Vmn1r28Q8R2C9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r28Q8R2C9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vmn1r28Q8R2C9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vmn1r28Q8R2C9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.83■□□□□ 0.61
Vmn1r28Q8R2C9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vmn1r28Q8R2C9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r28Q8R2C9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r28Q8R2C9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.6
Vmn1r28Q8R2C9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r28Q8R2C9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r28Q8R2C9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.8■□□□□ 0.6
Vmn1r28Q8R2C9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r28Q8R2C9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Gm9870-201ENSMUST00000063874 645 ntBASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r28Q8R2C9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms