Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf4Q8K4J2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf4Q8K4J2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf4Q8K4J2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.73■□□□□ 0.59
Ebf4Q8K4J2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf4Q8K4J2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.71■□□□□ 0.59
Ebf4Q8K4J2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ebf4Q8K4J2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf4Q8K4J2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf4Q8K4J2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Ebf4Q8K4J2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.7■□□□□ 0.58
Ebf4Q8K4J2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.7■□□□□ 0.58
Ebf4Q8K4J2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf4Q8K4J2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf4Q8K4J2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf4Q8K4J2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf4Q8K4J2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf4Q8K4J2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf4Q8K4J2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.68■□□□□ 0.58
Ebf4Q8K4J2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.67■□□□□ 0.58
Ebf4Q8K4J2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf4Q8K4J2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf4Q8K4J2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.67■□□□□ 0.58
Ebf4Q8K4J2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms