Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shtn1Q8K2Q9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.38■■□□□ 1.49
Shtn1Q8K2Q9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Shtn1Q8K2Q9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shtn1Q8K2Q9 Gm42642-201ENSMUST00000200683 355 ntBASIC24.38■■□□□ 1.49
Shtn1Q8K2Q9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shtn1Q8K2Q9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Shtn1Q8K2Q9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.37■■□□□ 1.49
Shtn1Q8K2Q9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shtn1Q8K2Q9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Spcs1-204ENSMUST00000226782 949 ntBASIC24.36■■□□□ 1.49
Shtn1Q8K2Q9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shtn1Q8K2Q9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Shtn1Q8K2Q9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Shtn1Q8K2Q9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.33■■□□□ 1.49
Shtn1Q8K2Q9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shtn1Q8K2Q9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shtn1Q8K2Q9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shtn1Q8K2Q9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shtn1Q8K2Q9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shtn1Q8K2Q9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shtn1Q8K2Q9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Shtn1Q8K2Q9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shtn1Q8K2Q9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shtn1Q8K2Q9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shtn1Q8K2Q9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shtn1Q8K2Q9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shtn1Q8K2Q9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shtn1Q8K2Q9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.3■■□□□ 1.48
Shtn1Q8K2Q9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Shtn1Q8K2Q9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Shtn1Q8K2Q9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shtn1Q8K2Q9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.28■■□□□ 1.48
Shtn1Q8K2Q9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.27■■□□□ 1.48
Shtn1Q8K2Q9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shtn1Q8K2Q9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.27■■□□□ 1.48
Shtn1Q8K2Q9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shtn1Q8K2Q9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shtn1Q8K2Q9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Shtn1Q8K2Q9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shtn1Q8K2Q9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Shtn1Q8K2Q9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shtn1Q8K2Q9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms