Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.29■■□□□ 1
Q8CDN1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Q8CDN1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Q8CDN1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q8CDN1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Q8CDN1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.28■■□□□ 1
Q8CDN1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.28■■□□□ 1
Q8CDN1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Q8CDN1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q8CDN1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q8CDN1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Q8CDN1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Q8CDN1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.27■■□□□ 1
Q8CDN1 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.27■■□□□ 1
Q8CDN1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Q8CDN1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q8CDN1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q8CDN1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q8CDN1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q8CDN1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Q8CDN1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Q8CDN1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q8CDN1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q8CDN1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q8CDN1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q8CDN1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Q8CDN1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q8CDN1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q8CDN1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.23■□□□□ 0.99
Q8CDN1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Q8CDN1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q8CDN1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Q8CDN1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Q8CDN1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q8CDN1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q8CDN1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q8CDN1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q8CDN1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q8CDN1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.21■□□□□ 0.99
Q8CDN1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q8CDN1 Serp2-204ENSMUST00000228055 705 ntBASIC21.21■□□□□ 0.99
Q8CDN1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q8CDN1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q8CDN1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q8CDN1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q8CDN1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q8CDN1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Q8CDN1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Q8CDN1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Q8CDN1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.19■□□□□ 0.98
Q8CDN1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q8CDN1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.19■□□□□ 0.98
Q8CDN1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.19■□□□□ 0.98
Q8CDN1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.19■□□□□ 0.98
Q8CDN1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.19■□□□□ 0.98
Q8CDN1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Q8CDN1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q8CDN1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q8CDN1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q8CDN1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q8CDN1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q8CDN1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Q8CDN1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Q8CDN1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
Q8CDN1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Q8CDN1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Q8CDN1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q8CDN1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Q8CDN1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q8CDN1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Q8CDN1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.17■□□□□ 0.98
Q8CDN1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q8CDN1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q8CDN1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q8CDN1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Q8CDN1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q8CDN1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.16■□□□□ 0.98
Q8CDN1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Q8CDN1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q8CDN1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q8CDN1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q8CDN1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q8CDN1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.15■□□□□ 0.98
Q8CDN1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q8CDN1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.15■□□□□ 0.98
Q8CDN1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms