Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm9949Q8C9F4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm9949Q8C9F4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm9949Q8C9F4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm9949Q8C9F4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm9949Q8C9F4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm9949Q8C9F4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm9949Q8C9F4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm9949Q8C9F4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm9949Q8C9F4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm9949Q8C9F4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Gm15546-201ENSMUST00000122095 826 ntBASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm9949Q8C9F4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Gm40881-201ENSMUST00000223397 166 ntBASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm9949Q8C9F4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm9949Q8C9F4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm9949Q8C9F4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gm9949Q8C9F4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms