Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3rf3Q8C120 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3rf3Q8C120 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3rf3Q8C120 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
Sh3rf3Q8C120 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3rf3Q8C120 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3rf3Q8C120 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3rf3Q8C120 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3rf3Q8C120 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3rf3Q8C120 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.39■■□□□ 1.02
Sh3rf3Q8C120 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3rf3Q8C120 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3rf3Q8C120 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3rf3Q8C120 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3rf3Q8C120 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3rf3Q8C120 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3rf3Q8C120 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3rf3Q8C120 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.35■■□□□ 1.01
Sh3rf3Q8C120 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3rf3Q8C120 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3rf3Q8C120 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Gm40881-201ENSMUST00000223397 166 ntBASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3rf3Q8C120 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3rf3Q8C120 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.33■■□□□ 1.01
Sh3rf3Q8C120 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3rf3Q8C120 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sh3rf3Q8C120 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.33■■□□□ 1
Sh3rf3Q8C120 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.32■■□□□ 1
Sh3rf3Q8C120 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3rf3Q8C120 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.32■■□□□ 1
Sh3rf3Q8C120 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3rf3Q8C120 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3rf3Q8C120 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3rf3Q8C120 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3rf3Q8C120 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.31■■□□□ 1
Sh3rf3Q8C120 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3rf3Q8C120 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3rf3Q8C120 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3rf3Q8C120 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.3■■□□□ 1
Sh3rf3Q8C120 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.29■■□□□ 1
Sh3rf3Q8C120 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Sh3rf3Q8C120 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sh3rf3Q8C120 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.29■■□□□ 1
Sh3rf3Q8C120 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Sh3rf3Q8C120 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.29■■□□□ 1
Sh3rf3Q8C120 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3rf3Q8C120 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sh3rf3Q8C120 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.28■■□□□ 1
Sh3rf3Q8C120 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.28■■□□□ 1
Sh3rf3Q8C120 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms