Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim35Q8C006 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.71■□□□□ 0.91
Trim35Q8C006 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim35Q8C006 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.71■□□□□ 0.91
Trim35Q8C006 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim35Q8C006 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Gm13323-201ENSMUST00000120245 1151 ntBASIC20.7■□□□□ 0.9
Trim35Q8C006 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Gm9959-201ENSMUST00000068277 390 ntBASIC20.7■□□□□ 0.9
Trim35Q8C006 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Trim35Q8C006 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim35Q8C006 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim35Q8C006 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.69■□□□□ 0.9
Trim35Q8C006 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim35Q8C006 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC20.69■□□□□ 0.9
Trim35Q8C006 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim35Q8C006 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim35Q8C006 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.69■□□□□ 0.9
Trim35Q8C006 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.68■□□□□ 0.9
Trim35Q8C006 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.68■□□□□ 0.9
Trim35Q8C006 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Trim35Q8C006 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim35Q8C006 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim35Q8C006 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim35Q8C006 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim35Q8C006 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim35Q8C006 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim35Q8C006 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim35Q8C006 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.67■□□□□ 0.9
Trim35Q8C006 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.67■□□□□ 0.9
Trim35Q8C006 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim35Q8C006 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim35Q8C006 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim35Q8C006 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.66■□□□□ 0.9
Trim35Q8C006 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim35Q8C006 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim35Q8C006 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim35Q8C006 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim35Q8C006 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim35Q8C006 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim35Q8C006 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim35Q8C006 Gm14117-201ENSMUST00000122417 843 ntBASIC20.65■□□□□ 0.9
Trim35Q8C006 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim35Q8C006 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim35Q8C006 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim35Q8C006 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Trim35Q8C006 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim35Q8C006 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim35Q8C006 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim35Q8C006 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim35Q8C006 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim35Q8C006 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim35Q8C006 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim35Q8C006 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim35Q8C006 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim35Q8C006 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim35Q8C006 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim35Q8C006 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms