Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Cpsf4Q8BQZ5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf4Q8BQZ5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.84■□□□□ 0.77
Cpsf4Q8BQZ5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf4Q8BQZ5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cpsf4Q8BQZ5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf4Q8BQZ5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.81■□□□□ 0.76
Cpsf4Q8BQZ5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf4Q8BQZ5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 Etf1-202ENSMUST00000180351 108 ntBASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf4Q8BQZ5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4Q8BQZ5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4Q8BQZ5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4Q8BQZ5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms