Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RfflQ6ZQM0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RfflQ6ZQM0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RfflQ6ZQM0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RfflQ6ZQM0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RfflQ6ZQM0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.93■□□□□ 0.78
RfflQ6ZQM0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.92■□□□□ 0.78
RfflQ6ZQM0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RfflQ6ZQM0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RfflQ6ZQM0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.91■□□□□ 0.78
RfflQ6ZQM0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RfflQ6ZQM0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RfflQ6ZQM0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RfflQ6ZQM0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RfflQ6ZQM0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RfflQ6ZQM0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RfflQ6ZQM0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RfflQ6ZQM0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RfflQ6ZQM0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RfflQ6ZQM0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RfflQ6ZQM0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RfflQ6ZQM0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RfflQ6ZQM0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms