Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ddx55Q6ZPL9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Gm40848-201ENSMUST00000221998 324 ntBASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Ddx55Q6ZPL9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Gm42642-201ENSMUST00000200683 355 ntBASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx55Q6ZPL9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx55Q6ZPL9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Ddx55Q6ZPL9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx55Q6ZPL9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx55Q6ZPL9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.72■■□□□ 1.39
Ddx55Q6ZPL9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.72■■□□□ 1.39
Ddx55Q6ZPL9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.72■■□□□ 1.39
Ddx55Q6ZPL9 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.72■■□□□ 1.39
Ddx55Q6ZPL9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.71■■□□□ 1.39
Ddx55Q6ZPL9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx55Q6ZPL9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx55Q6ZPL9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx55Q6ZPL9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx55Q6ZPL9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Gm37179-201ENSMUST00000194862 823 ntBASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.7■■□□□ 1.38
Ddx55Q6ZPL9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx55Q6ZPL9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx55Q6ZPL9 Smad6-203ENSMUST00000179458 273 ntBASIC23.69■■□□□ 1.38
Ddx55Q6ZPL9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.69■■□□□ 1.38
Ddx55Q6ZPL9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ddx55Q6ZPL9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx55Q6ZPL9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx55Q6ZPL9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx55Q6ZPL9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx55Q6ZPL9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.66■■□□□ 1.38
Ddx55Q6ZPL9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.66■■□□□ 1.38
Ddx55Q6ZPL9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx55Q6ZPL9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx55Q6ZPL9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ddx55Q6ZPL9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx55Q6ZPL9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx55Q6ZPL9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.64■■□□□ 1.37
Ddx55Q6ZPL9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx55Q6ZPL9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx55Q6ZPL9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx55Q6ZPL9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx55Q6ZPL9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms