Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.73■□□□□ 0.75
VcanQ62059 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VcanQ62059 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.73■□□□□ 0.75
VcanQ62059 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VcanQ62059 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.73■□□□□ 0.75
VcanQ62059 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.73■□□□□ 0.75
VcanQ62059 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.72■□□□□ 0.75
VcanQ62059 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VcanQ62059 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VcanQ62059 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VcanQ62059 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VcanQ62059 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VcanQ62059 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VcanQ62059 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VcanQ62059 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.71■□□□□ 0.75
VcanQ62059 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VcanQ62059 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VcanQ62059 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
VcanQ62059 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
VcanQ62059 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VcanQ62059 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VcanQ62059 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VcanQ62059 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.69■□□□□ 0.74
VcanQ62059 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.69■□□□□ 0.74
VcanQ62059 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VcanQ62059 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VcanQ62059 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VcanQ62059 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VcanQ62059 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VcanQ62059 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
VcanQ62059 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VcanQ62059 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VcanQ62059 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VcanQ62059 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VcanQ62059 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.67■□□□□ 0.74
VcanQ62059 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VcanQ62059 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VcanQ62059 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VcanQ62059 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VcanQ62059 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Gm7143-201ENSMUST00000222811 859 ntBASIC19.66■□□□□ 0.74
VcanQ62059 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.66■□□□□ 0.74
VcanQ62059 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VcanQ62059 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.66■□□□□ 0.74
VcanQ62059 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VcanQ62059 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VcanQ62059 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VcanQ62059 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VcanQ62059 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VcanQ62059 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
VcanQ62059 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.64■□□□□ 0.73
VcanQ62059 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VcanQ62059 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VcanQ62059 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.63■□□□□ 0.73
VcanQ62059 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VcanQ62059 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VcanQ62059 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.63■□□□□ 0.73
VcanQ62059 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.63■□□□□ 0.73
VcanQ62059 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.63■□□□□ 0.73
VcanQ62059 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.63■□□□□ 0.73
VcanQ62059 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.63■□□□□ 0.73
VcanQ62059 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VcanQ62059 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VcanQ62059 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VcanQ62059 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VcanQ62059 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VcanQ62059 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VcanQ62059 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VcanQ62059 Gm20760-201ENSMUST00000179197 648 ntBASIC19.62■□□□□ 0.73
VcanQ62059 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VcanQ62059 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VcanQ62059 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VcanQ62059 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
VcanQ62059 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
VcanQ62059 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VcanQ62059 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms