Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.22■□□□□ 0.35
Scarb1Q61009 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scarb1Q61009 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scarb1Q61009 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scarb1Q61009 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scarb1Q61009 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scarb1Q61009 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scarb1Q61009 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.2■□□□□ 0.34
Scarb1Q61009 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scarb1Q61009 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.2■□□□□ 0.34
Scarb1Q61009 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scarb1Q61009 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scarb1Q61009 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scarb1Q61009 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scarb1Q61009 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Scarb1Q61009 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scarb1Q61009 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scarb1Q61009 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scarb1Q61009 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.19■□□□□ 0.34
Scarb1Q61009 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scarb1Q61009 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.19■□□□□ 0.34
Scarb1Q61009 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.19■□□□□ 0.34
Scarb1Q61009 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scarb1Q61009 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scarb1Q61009 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scarb1Q61009 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Scarb1Q61009 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Scarb1Q61009 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scarb1Q61009 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.17■□□□□ 0.34
Scarb1Q61009 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.17■□□□□ 0.34
Scarb1Q61009 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.17■□□□□ 0.34
Scarb1Q61009 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Scarb1Q61009 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Scarb1Q61009 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.17■□□□□ 0.34
Scarb1Q61009 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scarb1Q61009 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.17■□□□□ 0.34
Scarb1Q61009 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scarb1Q61009 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.16■□□□□ 0.34
Scarb1Q61009 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb1Q61009 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb1Q61009 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.16■□□□□ 0.34
Scarb1Q61009 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb1Q61009 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb1Q61009 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Scarb1Q61009 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Scarb1Q61009 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Gm11687-201ENSMUST00000118911 886 ntBASIC17.15■□□□□ 0.34
Scarb1Q61009 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.15■□□□□ 0.34
Scarb1Q61009 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb1Q61009 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scarb1Q61009 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Scarb1Q61009 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb1Q61009 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.14■□□□□ 0.33
Scarb1Q61009 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.13■□□□□ 0.33
Scarb1Q61009 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scarb1Q61009 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.13■□□□□ 0.33
Scarb1Q61009 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Scarb1Q61009 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.13■□□□□ 0.33
Scarb1Q61009 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms