Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom1Q5SX79 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom1Q5SX79 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Shroom1Q5SX79 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.87■■□□□ 1.09
Shroom1Q5SX79 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.87■■□□□ 1.09
Shroom1Q5SX79 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.87■■□□□ 1.09
Shroom1Q5SX79 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Shroom1Q5SX79 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Shroom1Q5SX79 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom1Q5SX79 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom1Q5SX79 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom1Q5SX79 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Shroom1Q5SX79 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom1Q5SX79 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom1Q5SX79 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Shroom1Q5SX79 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shroom1Q5SX79 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
Shroom1Q5SX79 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.83■■□□□ 1.09
Shroom1Q5SX79 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Shroom1Q5SX79 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shroom1Q5SX79 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shroom1Q5SX79 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom1Q5SX79 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
Shroom1Q5SX79 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Shroom1Q5SX79 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.79■■□□□ 1.08
Shroom1Q5SX79 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.79■■□□□ 1.08
Shroom1Q5SX79 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Gm7143-201ENSMUST00000222811 859 ntBASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom1Q5SX79 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom1Q5SX79 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.77■■□□□ 1.07
Shroom1Q5SX79 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Shroom1Q5SX79 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Shroom1Q5SX79 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms