Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam196aQ3USH1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.89■□□□□ 0.93
Fam196aQ3USH1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam196aQ3USH1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Fam196aQ3USH1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam196aQ3USH1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam196aQ3USH1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Gm43530-201ENSMUST00000195920 274 ntBASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.88■□□□□ 0.93
Fam196aQ3USH1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.87■□□□□ 0.93
Fam196aQ3USH1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam196aQ3USH1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Fam196aQ3USH1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam196aQ3USH1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.86■□□□□ 0.93
Fam196aQ3USH1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.86■□□□□ 0.93
Fam196aQ3USH1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam196aQ3USH1 Gm22325-201ENSMUST00000158904 308 ntBASIC20.85■□□□□ 0.93
Fam196aQ3USH1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam196aQ3USH1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Fam196aQ3USH1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.85■□□□□ 0.93
Fam196aQ3USH1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Fam196aQ3USH1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Fam196aQ3USH1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam196aQ3USH1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam196aQ3USH1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam196aQ3USH1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Fam196aQ3USH1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Fam196aQ3USH1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Fam196aQ3USH1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Fam196aQ3USH1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Fam196aQ3USH1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam196aQ3USH1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam196aQ3USH1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam196aQ3USH1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam196aQ3USH1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.81■□□□□ 0.92
Fam196aQ3USH1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam196aQ3USH1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Fam196aQ3USH1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.8■□□□□ 0.92
Fam196aQ3USH1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam196aQ3USH1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam196aQ3USH1 Gm10653-202ENSMUST00000139570 835 ntBASIC20.79■□□□□ 0.92
Fam196aQ3USH1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam196aQ3USH1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fam196aQ3USH1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Gm12441-201ENSMUST00000121806 588 ntBASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam196aQ3USH1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms