Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf1P81269 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Atf1P81269 Gm13238-201ENSMUST00000117655 780 ntBASIC17.79■□□□□ 0.44
Atf1P81269 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Atf1P81269 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atf1P81269 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.79■□□□□ 0.44
Atf1P81269 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf1P81269 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf1P81269 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atf1P81269 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Atf1P81269 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf1P81269 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf1P81269 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf1P81269 Gm43566-201ENSMUST00000196851 808 ntBASIC17.78■□□□□ 0.44
Atf1P81269 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf1P81269 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf1P81269 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Atf1P81269 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf1P81269 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf1P81269 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Atf1P81269 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.77■□□□□ 0.44
Atf1P81269 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf1P81269 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf1P81269 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.77■□□□□ 0.44
Atf1P81269 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf1P81269 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atf1P81269 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atf1P81269 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.77■□□□□ 0.43
Atf1P81269 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atf1P81269 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf1P81269 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.76■□□□□ 0.43
Atf1P81269 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf1P81269 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf1P81269 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atf1P81269 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.76■□□□□ 0.43
Atf1P81269 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Atf1P81269 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Atf1P81269 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf1P81269 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Atf1P81269 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf1P81269 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.73■□□□□ 0.43
Atf1P81269 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atf1P81269 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.73■□□□□ 0.43
Atf1P81269 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf1P81269 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Atf1P81269 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf1P81269 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf1P81269 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atf1P81269 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf1P81269 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Atf1P81269 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.71■□□□□ 0.43
Atf1P81269 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.71■□□□□ 0.43
Atf1P81269 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf1P81269 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Atf1P81269 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.7■□□□□ 0.42
Atf1P81269 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.7■□□□□ 0.42
Atf1P81269 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atf1P81269 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf1P81269 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atf1P81269 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atf1P81269 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms