Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl9P51670 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl9P51670 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl9P51670 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.96■□□□□ 0.47
Ccl9P51670 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccl9P51670 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl9P51670 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccl9P51670 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ccl9P51670 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccl9P51670 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.95■□□□□ 0.46
Ccl9P51670 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccl9P51670 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccl9P51670 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl9P51670 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccl9P51670 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl9P51670 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl9P51670 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl9P51670 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl9P51670 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl9P51670 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl9P51670 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccl9P51670 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl9P51670 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl9P51670 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl9P51670 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl9P51670 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl9P51670 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl9P51670 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Ccl9P51670 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl9P51670 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.92■□□□□ 0.46
Ccl9P51670 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl9P51670 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccl9P51670 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccl9P51670 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl9P51670 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl9P51670 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl9P51670 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.91■□□□□ 0.46
Ccl9P51670 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccl9P51670 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.91■□□□□ 0.46
Ccl9P51670 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccl9P51670 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl9P51670 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccl9P51670 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccl9P51670 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccl9P51670 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccl9P51670 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccl9P51670 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccl9P51670 Gm45444-201ENSMUST00000211394 898 ntBASIC17.9■□□□□ 0.46
Ccl9P51670 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ccl9P51670 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Ccl9P51670 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccl9P51670 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccl9P51670 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccl9P51670 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccl9P51670 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ccl9P51670 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
Ccl9P51670 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccl9P51670 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccl9P51670 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccl9P51670 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccl9P51670 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccl9P51670 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccl9P51670 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccl9P51670 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl9P51670 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccl9P51670 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccl9P51670 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccl9P51670 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccl9P51670 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccl9P51670 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms