Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd27P41272 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd27P41272 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd27P41272 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cd27P41272 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cd27P41272 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Cd27P41272 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd27P41272 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.52■□□□□ 0.23
Cd27P41272 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd27P41272 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd27P41272 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.52■□□□□ 0.23
Cd27P41272 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd27P41272 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd27P41272 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd27P41272 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cd27P41272 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd27P41272 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd27P41272 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cd27P41272 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Cd27P41272 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.5■□□□□ 0.23
Cd27P41272 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd27P41272 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.49■□□□□ 0.23
Cd27P41272 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.49■□□□□ 0.23
Cd27P41272 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.49■□□□□ 0.23
Cd27P41272 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd27P41272 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Cd27P41272 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
Cd27P41272 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
Cd27P41272 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd27P41272 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.47■□□□□ 0.23
Cd27P41272 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Cd27P41272 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd27P41272 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd27P41272 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cd27P41272 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd27P41272 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.46■□□□□ 0.23
Cd27P41272 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.46■□□□□ 0.23
Cd27P41272 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cd27P41272 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cd27P41272 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Gm7143-201ENSMUST00000222811 859 ntBASIC16.46■□□□□ 0.23
Cd27P41272 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.46■□□□□ 0.23
Cd27P41272 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cd27P41272 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd27P41272 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.46■□□□□ 0.22
Cd27P41272 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cd27P41272 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.45■□□□□ 0.22
Cd27P41272 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Cd27P41272 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.45■□□□□ 0.22
Cd27P41272 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.45■□□□□ 0.22
Cd27P41272 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.45■□□□□ 0.22
Cd27P41272 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.45■□□□□ 0.22
Cd27P41272 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd27P41272 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd27P41272 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd27P41272 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd27P41272 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd27P41272 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cd27P41272 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cd27P41272 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd27P41272 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd27P41272 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cd27P41272 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cd27P41272 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd27P41272 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Cd27P41272 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms