Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Slc6a13P31649 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a13P31649 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a13P31649 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc6a13P31649 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a13P31649 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a13P31649 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a13P31649 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a13P31649 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Slc6a13P31649 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a13P31649 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.91■□□□□ 0.94
Slc6a13P31649 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a13P31649 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.91■□□□□ 0.94
Slc6a13P31649 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a13P31649 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a13P31649 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Slc6a13P31649 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a13P31649 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Slc6a13P31649 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a13P31649 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.89■□□□□ 0.93
Slc6a13P31649 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a13P31649 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a13P31649 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Slc6a13P31649 Gm22238-201ENSMUST00000175222 88 ntBASIC20.88■□□□□ 0.93
Slc6a13P31649 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.88■□□□□ 0.93
Slc6a13P31649 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc6a13P31649 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a13P31649 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a13P31649 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc6a13P31649 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a13P31649 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a13P31649 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.86■□□□□ 0.93
Slc6a13P31649 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.86■□□□□ 0.93
Slc6a13P31649 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a13P31649 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slc6a13P31649 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a13P31649 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a13P31649 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a13P31649 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Slc6a13P31649 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Slc6a13P31649 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Slc6a13P31649 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a13P31649 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc6a13P31649 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a13P31649 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Slc6a13P31649 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a13P31649 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a13P31649 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Slc6a13P31649 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a13P31649 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a13P31649 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Slc6a13P31649 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a13P31649 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Slc6a13P31649 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.82■□□□□ 0.92
Slc6a13P31649 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Slc6a13P31649 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.82■□□□□ 0.92
Slc6a13P31649 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Slc6a13P31649 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a13P31649 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a13P31649 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a13P31649 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a13P31649 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc6a13P31649 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc6a13P31649 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms