Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.85■■□□□ 1.09
Ttc3O88196 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc3O88196 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Ttc3O88196 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc3O88196 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc3O88196 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Ttc3O88196 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.84■■□□□ 1.09
Ttc3O88196 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Ttc3O88196 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc3O88196 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Ttc3O88196 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc3O88196 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc3O88196 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc3O88196 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc3O88196 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc3O88196 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ttc3O88196 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ttc3O88196 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.82■■□□□ 1.08
Ttc3O88196 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ttc3O88196 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ttc3O88196 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.82■■□□□ 1.08
Ttc3O88196 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ttc3O88196 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.81■■□□□ 1.08
Ttc3O88196 Gm43017-201ENSMUST00000198296 752 ntBASIC21.81■■□□□ 1.08
Ttc3O88196 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ttc3O88196 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Ttc3O88196 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc3O88196 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc3O88196 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc3O88196 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.8■■□□□ 1.08
Ttc3O88196 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc3O88196 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc3O88196 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.8■■□□□ 1.08
Ttc3O88196 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc3O88196 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc3O88196 Mir7075-201ENSMUST00000184187 82 ntBASIC21.79■■□□□ 1.08
Ttc3O88196 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc3O88196 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc3O88196 Gm43173-201ENSMUST00000202246 593 ntBASIC21.79■■□□□ 1.08
Ttc3O88196 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc3O88196 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.78■■□□□ 1.08
Ttc3O88196 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ttc3O88196 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ttc3O88196 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ttc3O88196 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ttc3O88196 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc3O88196 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc3O88196 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc3O88196 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc3O88196 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Ttc3O88196 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ttc3O88196 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ttc3O88196 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ttc3O88196 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ttc3O88196 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Ttc3O88196 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ttc3O88196 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.76■■□□□ 1.07
Ttc3O88196 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ttc3O88196 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ttc3O88196 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ttc3O88196 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.75■■□□□ 1.07
Ttc3O88196 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
Ttc3O88196 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
Ttc3O88196 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Ttc3O88196 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ttc3O88196 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ttc3O88196 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Ttc3O88196 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.74■■□□□ 1.07
Ttc3O88196 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc3O88196 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ttc3O88196 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ttc3O88196 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc3O88196 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ttc3O88196 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.73■■□□□ 1.07
Ttc3O88196 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.73■■□□□ 1.07
Ttc3O88196 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
Ttc3O88196 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.73■■□□□ 1.07
Ttc3O88196 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc3O88196 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ttc3O88196 Spcs1-204ENSMUST00000226782 949 ntBASIC21.72■■□□□ 1.07
Ttc3O88196 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.72■■□□□ 1.07
Ttc3O88196 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Ttc3O88196 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc3O88196 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
Ttc3O88196 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc3O88196 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc3O88196 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.71■■□□□ 1.07
Ttc3O88196 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms